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Items tagged with: genomes
🎉 New preprint from the (MDM) lab:
🔗 https://www.biorxiv.org/content/10.1101/2023.11.22.567924v1
❓ How accurately can we predict diverse #bacteriophage bacteria-interactions from their #genomes only ?
🦠 We created a matrix of >38k #phage-#bacteria interactions to find out (=> AUROC 86%) & used our predictions to recommend tailored phage cocktails.
Predicting which phages infect which specific strains would allow to better fight bacterial infections and understand #microbial ecology.
1/n
#microbiology #virus #phagotherapy
Predicting phage-bacteria interactions at the strain level from genomes
Predicting how phages can selectively infect specific bacterial strains holds promise for developing novel approaches to combat bacterial infections and better understanding microbial ecology.bioRxiv
Assessing species coverage 🐝🦋🐞🦗🕷️🦀 and assembly quality of rapidly accumulating sequenced #genomes - https://academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac006/6537158
Assessing species coverage and assembly quality of rapidly accumulating sequenced genomes
AbstractBackground. Ambitious initiatives to coordinate genome sequencing of Earth's biodiversity mean that the accumulation of genomic data is growing rapidly.Feron, Romain (Oxford University Press)